Peter,
I think I understand - and I'm not expecting MetaBox to manage capabilities. But for example when creating a CPT with MetaBox, there is a Capability type
option, and one can choose either Post, Page, or Custom.
By choosing Custom, I can then use another plugin to manage these capabilities for my user roles.
I would like the same flexibility for custom taxonomies and for Relationships. Basic capabilities such as read/edit/create would do the job. So my question is whether MetaBox can define the capabilities so that I can manage it with a third-party plugin.